PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009598818.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 551aa    MW: 60040.2 Da    PI: 7.2927
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009598818.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.71.6e-30302360259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  XP_009598818.1 302 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGSHNHP 360
                     7*********************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.3E-33286362IPR003657WRKY domain
SuperFamilySSF1182901.01E-27294362IPR003657WRKY domain
PROSITE profilePS5081129.608296362IPR003657WRKY domain
SMARTSM007741.9E-36301361IPR003657WRKY domain
PfamPF031061.8E-26303360IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 551 aa     Download sequence    Send to blast
MDKGWGLTLE NSSDKVGFFN NKPFFGFNLS PRLNNIKGGE MFSGAEFPAD EKRGMVNEVD  60
FFSEKKSIHD DVVVKKGNSQ GNNTMRTGLF VNTGLQLVTA NTGISDQSTV DDGISSEVEE  120
KRTKNELAQL QVELERMNTE NQRLKGMLTQ VTNSYSALQM HLVTLMQQQQ QQQLISRTES  180
THNHVVVEVK SEEKNQEKDG NIVPRQFMEL GPSSTKADPM DEPTQSHSTS EERTLSGSPR  240
NNMELSRDKA IGREESPESE SWVPNKVPKL MNSSKPVEQT TEATMRKARV SVRARSEAPM  300
ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEDRTILI TTYEGSHNHP  360
LPPAAMAMAS TTSAAANMLL SGSMPSADGL MNTNFLARTI LPCSSNMATI SASAPFPTVT  420
LDLTQNPNAM SNYHQRNTAT QFQVPLPAGL NHPNFVGSMS TPQIPQVLGQ ALYNQSRFSG  480
LQVSQDNIQP PSFSDTLTAA TAAITADPNF TAALAAAISS IIGGSHPNNG NNSTSGPTSN  540
SNKTSSFLGN Q
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A7e-23288364176WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009598818.10.0PREDICTED: probable WRKY transcription factor 31 isoform X2
SwissprotQ9C5191e-159WRKY6_ARATH; WRKY transcription factor 6
TrEMBLC7E5X80.0C7E5X8_CAPAN; Transcription factor WRKY
STRINGPGSC0003DMT4000424000.0(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-131WRKY family protein